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SRX004340: 454 whole genome shotgun sequencing of genomic DNA paired-end library '454-1167' containing sample 'BROAD:SEQUENCING_SAMPLE:22682.0'
1 LS454 (454 GS FLX) run: 134,924 spots, 40.5M bases, 82.2Mb downloads

UUID: c949f261-c51a-4b17-bc64-8fa26e595367
Design: 15x fragment; 30x physical paired
Submitted by: Broad Institute (BI)
Study: Reference genome for the Human Microbiome Project
PRJNA32461 • SRP001666 • All experiments • All runs
show Abstracthide Abstract
Reference genome for the Human Microbiome Project. Another assembly of this organism was generated independently from the HMP reference genome, using PacBio and Illumina sequence reads.
Sample: Generic sample from Coprobacillus sp. D6
SAMN00102935 • SRS002764 • All experiments • All runs
Organism: Coprobacillus cateniformis
Library:
Name: 454-1167
Instrument: 454 GS FLX
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Spot descriptor:
         5  forward           reverse

Experiment attributes: (show all 5 attributes...) (hide...)
gssr_id: 22682.1
lsid: BROAD:SEQUENCING_SAMPLE:22682.1
material_type: Genomic DNA
project: G1424
work_request: 16661
Pipeline: show...hide...
NameStepProgramVersion
base caller2008-08-15 18:35:01.0454BaseCaller2.0.00.17
Runs: 1 run, 134,924 spots, 40.5M bases, 82.2Mb
Run# of Spots# of BasesSizePublished
SRR015779134,92440.5M82.2Mb2009-05-13

ID:
4596

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